Discography
* for Grammy Award Winner
** for Grammy Award Nomination
| 1962 | La Perfecta | Alegre |
| 1963 | El Molestoso | Alegre |
| 1964 | Lo Que Traigo Es Sabroso | Alegre |
| 1964 | Echando Pa’Lante | Tico |
| 1965 | Azucar Pa’ Ti | Tico |
| 1965 | Mozambique | Tico |
| 1966 | El Sonido Nuevo w/ Cal Tjader | Verve |
| 1967 | Molasses | Tico |
| 1967 | Bamboleate w/ Cal Tjader | Tico |
| 1968 | Champagne | Tico |
| 1969 | Justicia | Tico |
| 1970 | Superimposition | Tico |
| 1971 | Vamonos Pa’l Monte | Tico |
| 1971 | Live at the University of Puerto Rico | Coco |
| 1971 | Harlem River Drive | Roulette |
| 1972 | Live at Sing Sing (Vol 1) | Tico |
| 1972 | Live at Sing Sing (Vol 2) | Tico |
| 1973 | Sentido | Coco |
| 1974 | The Sun of Latin Music* | Coco |
| 1978 | Lucumi Macumba Voodoo** | Epic |
| 1982 | Eddie Palmieri** | Barbaro |
| 1984 | Palo Pa’ Rumba* | Musica Latina |
| 1985 | Solito* | Musica Latina |
| 1987 | La Verdad* | Sonido Inc. |
| 1992 | Sueño** | Intuition |
| 1992 | Llego la India via Eddie Palmieri | Soho Sounds |
| 1994 | Palmas** | Elektra/Nonesuch |
| 1995 | Arete** | Tropijazz |
| 1996 | Vortex | Tropijazz |
| 1998 | El Rumbero del Piano** | RMM Records |
| 2000 | Masterpiece/Obra Maestra w/ Tito Puente* | RMM Records |
| 2002 | La Perfecta II | Concord Records |
| 2003 | Ritmo Caliente | Concord Records |
| 2005 | Listen Here!* | Concord Records |
| 2006 | Simpatico w/ Brian Lynch* | Artist Share |